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PhD Student

Tim Frederic Runge

Postal address
Institut für Informatik
Albert-Ludwigs-Universität Freiburg
Sekretariat Hutter/Maschinelles Lernen
Georges-Köhler-Allee 074
79110 Freiburg, Germany
Fax
+49 761 203-74217
Office
Home office

Publications

2024

Patil, Sharat; Runge, Frederic; Franke, Jörg K. H.; Hutter, Frank

Towards Generative RNA Design with Tertiary Interactions Workshop

The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024), 2024, (Oral Presentation).

Matus, Dominika; Runge, Frederic; Franke, Jörg K. H.; Gerne, Lars; Uhl, Michael; Hutter, Frank; Backofen, Rolf

RNA-Protein Interaction Prediction via Sequence Embeddings Workshop

The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024), 2024.

2023

Runge, Frederic; Franke, Jörg K. H.; Fertmann, Daniel; Hutter, Frank

Rethinking Performance Measures of RNA Secondary Structure Problems Workshop

Machine Learning for Structural Biology Workshop, (NeruIPS 2023), 2023.

Runge, Frederic; Franke, Jörg K. H.; Hutter, Frank

Towards Automated Design of Riboswitches Workshop

The 2023 ICML Workshop on Computational Biology, 2023.

2022

Franke, Jörg; Runge, Frederic; Hutter, Frank

Probabilistic Transformer: Modelling Ambiguities and Distributions for RNA Folding and Molecule Design Inproceedings

In: Oh, Alice H.; Agarwal, Alekh; Belgrave, Danielle; Cho, Kyunghyun (Ed.): Advances in Neural Information Processing Systems (NeurIPS 2022), 2022.

2019

Runge, Frederic; Stoll, Danny; Falkner, Stefan; Hutter, Frank

Learning to Design RNA Inproceedings

In: International Conference on Learning Representations, 2019.