2024
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Patil, Sharat; Runge, Frederic; Franke, Jörg K. H.; Hutter, Frank Towards Generative RNA Design with Tertiary Interactions Workshop The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024), 2024, (Oral Presentation). @workshop{nokey,
title = {Towards Generative RNA Design with Tertiary Interactions},
author = {Sharat Patil and Frederic Runge and Jörg K. H. Franke and Frank Hutter},
year = {2024},
booktitle = {The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024)},
keywords = {}
}
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Matus, Dominika; Runge, Frederic; Franke, Jörg K. H.; Gerne, Lars; Uhl, Michael; Hutter, Frank; Backofen, Rolf RNA-Protein Interaction Prediction via Sequence Embeddings Workshop The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024), 2024. @workshop{nokey,
title = {RNA-Protein Interaction Prediction via Sequence Embeddings},
author = {Dominika Matus and Frederic Runge and Jörg K. H. Franke and Lars Gerne and Michael Uhl and Frank Hutter and Rolf Backofen},
year = {2024},
booktitle = {The Generative and Experimental perspectives in bioMolecular design (GEM) workshop (ICLR 2024)},
keywords = {}
}
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2023
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Runge, Frederic; Franke, Jörg K. H.; Fertmann, Daniel; Hutter, Frank Rethinking Performance Measures of RNA Secondary Structure Problems Workshop Machine Learning for Structural Biology Workshop, (NeruIPS 2023), 2023. @workshop{runge2023rethinking,
title = {Rethinking Performance Measures of RNA Secondary Structure Problems},
author = {Frederic Runge and Jörg K. H. Franke and Daniel Fertmann and Frank Hutter},
year = {2023},
booktitle = {Machine Learning for Structural Biology Workshop, (NeruIPS 2023)},
keywords = {}
}
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Runge, Frederic; Franke, Jörg K. H.; Hutter, Frank Towards Automated Design of Riboswitches Workshop The 2023 ICML Workshop on Computational Biology, 2023. @workshop{runge2023towards,
title = {Towards Automated Design of Riboswitches},
author = {Frederic Runge and Jörg K. H. Franke and Frank Hutter},
year = {2023},
booktitle = {The 2023 ICML Workshop on Computational Biology},
keywords = {}
}
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2022
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Franke, Jörg; Runge, Frederic; Hutter, Frank Probabilistic Transformer: Modelling Ambiguities and Distributions for RNA Folding and Molecule Design Inproceedings In: Oh, Alice H.; Agarwal, Alekh; Belgrave, Danielle; Cho, Kyunghyun (Ed.): Advances in Neural Information Processing Systems (NeurIPS 2022), 2022. @inproceedings{franke2022probabilistic,
title = {Probabilistic Transformer: Modelling Ambiguities and Distributions for RNA Folding and Molecule Design},
author = {Jörg Franke and Frederic Runge and Frank Hutter},
editor = {Alice H. Oh and Alekh Agarwal and Danielle Belgrave and Kyunghyun Cho},
year = {2022},
booktitle = {Advances in Neural Information Processing Systems (NeurIPS 2022)},
keywords = {}
}
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2019
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Runge, Frederic; Stoll, Danny; Falkner, Stefan; Hutter, Frank Learning to Design RNA Inproceedings In: International Conference on Learning Representations, 2019. @inproceedings{runge2019learning,
title = {Learning to Design RNA},
author = {Frederic Runge and Danny Stoll and Stefan Falkner and Frank Hutter},
year = {2019},
booktitle = {International Conference on Learning Representations},
keywords = {}
}
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